Widespread gyrovirus co-infections in backyard chickens in Türkiye: molecular and Phylogenetic insights


Atasoy M. O., Turan T., Duran Yelken S., Özbek R., Işıdan H.

VETERINARY RESEARCH COMMUNICATIONS, cilt.50, sa.4, ss.1-13, 2026 (SCI-Expanded, Scopus) identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 50 Sayı: 4
  • Basım Tarihi: 2026
  • Doi Numarası: 10.1007/s11259-026-11241-0
  • Dergi Adı: VETERINARY RESEARCH COMMUNICATIONS
  • Derginin Tarandığı İndeksler: Scopus, Science Citation Index Expanded (SCI-EXPANDED), BIOSIS, EMBASE, MEDLINE
  • Sayfa Sayıları: ss.1-13
  • Sivas Cumhuriyet Üniversitesi Adresli: Evet

Özet

Abstract

Introduction: Gyroviruses are widespread small DNA viruses infecting poultry and other hosts, yet their diversity and coinfection dynamics in backyard systems remained poorly understood.


Materials and methods: Tissue samples from 100 clinically healthy backyard chickens across five provinces in Türkiye, between 2020 and 2021, were screened using species-specific PCR assays targeting six gyroviruses.


Results: The Gyroviral DNA was detected in 90.0% of samples (90/100), with CAV identified in 71.0% (71/100), AGyV2 in 59.0% (59/100), GyV3 in 8.0% (8/100), GyV4 in 22.0% (22/100), GyVTu789 in 19.0% (19/100), and GyV7-SF in 18.0% (18/100) of samples. Co-infections were frequent, most notably between CAV and AGyV2, with a co occurrence rate of 25.6%. Phylogenetic analysis of partial VP1 sequences revealed that circulating strains were largely consistent with global lineages, while also displaying detectable genetic variability, particularly within GyV4. Notably, GyVTu789 and GyV7-SF were identified for the first time in chickens in Türkiye, extending their known geographic range. The high rate of co-detection highlights the concurrent circulation of multiple gyroviruses in backyard poultry populations.


Conclusions: These findings provide a comprehensive overview of gyrovirus diversity and circulation dynamics, pinpointing the need for continued surveillance to better understand their epidemiology and potential impact on poultry health.


Keywords: Avian gyrovirus 2; Chicken anemia virus; Gyrovirus 3; Gyrovirus 4; Gyrovirus GyV7-SF; Gyrovirus Tu789; Türkiye.