Publications & Works

Articles Published in Journals That Entered SCI, SSCI and AHCI Indexes

Classification of brain tumors from MR images using deep transfer learning

Polat Ö. , Güngen C.
Journal Of Supercomputing, vol.77, no.7, pp.7236-7252, 2021 (Journal Indexed in SCI) identifier identifier

Determination of Pneumonia in X-ray Chest Images by Using Convolutional Neural Network

Polat Ö. , Ölmez Z., Ölmez T.
Turkish Journal Of Electrical Engineering And Computer Sciences, vol.29, pp.1615-1627, 2021 (Journal Indexed in SCI Expanded)

Automatic classification of volcanic rocks from thin section images using transfer learning networks

POLAT Ö. , Polat A., EKİCİ T.
NEURAL COMPUTING & APPLICATIONS, 2021 (Journal Indexed in SCI) identifier identifier

Protein fold classification with Grow-and-Learn network

Polat Ö. , Dokur Z.
TURKISH JOURNAL OF ELECTRICAL ENGINEERING AND COMPUTER SCIENCES, vol.25, no.2, pp.1184-1196, 2017 (Journal Indexed in SCI) identifier identifier

Protein Fold Recognition Using Self-Organizing Map Neural Network

POLAT Ö. , Dokur Z.
CURRENT BIOINFORMATICS, vol.11, no.4, pp.451-458, 2016 (Journal Indexed in SCI) identifier identifier

Motifs and structural blocks retrieval by GHT

Cantoni V., Ferone A., Petrosino A., POLAT Ö.
EUROPEAN PHYSICAL JOURNAL PLUS, vol.129, no.6, 2014 (Journal Indexed in SCI) identifier identifier

Protein motifs retrieval by SS terns occurrences

Cantoni V., Ferone A., Ozbudak Ö. , Petrosino A.
PATTERN RECOGNITION LETTERS, vol.34, no.5, pp.559-563, 2013 (Journal Indexed in SCI) identifier identifier

Articles Published in Other Journals

Detection of Covid-19 from Chest CT Images Using Xception Architecture: A Deep Transfer Learning Based Approach

Polat Ö.
Sakarya University Journal of Science, vol.25, no.3, pp.813-823, 2021 (Refereed Journals of Other Institutions)

Determination of highly effective attributes in fold level classification of proteins

POLAT Ö.
International Advanced Researches and Engineering Journal, vol.3, no.1, pp.32-39, 2019 (Refereed Journals of Other Institutions)

Hough Dönüşümü Kullanılarak Protein Yapısal Bloklarının Karşılaştırılması

ÖZBUDAK Ö. , DOKUR Z., CANTONI V.
EMO Bilimsel Dergi, vol.3, no.6, pp.91-97, 2014 (Other Refereed National Journals)

Refereed Congress / Symposium Publications in Proceedings

Classification of Brain Tumors using Convolutional Neural Network from MR Images Evrisimsel Sinir Agi Kullanilarak MR Goruntulerinden Beyin Tumorlerinin Siniflandirilmasi

Gungen C., POLAT Ö. , KARAKIŞ R.
28th Signal Processing and Communications Applications Conference, SIU 2020, Gaziantep, Turkey, 5 - 07 October 2020 identifier

GAL A˘gı ile Cinsiyet Sınıflama

POLAT Ö.
27. IEEE Sinyal İşleme ve İletişim Uygulamaları Kurultayı, SIU 2019, Turkey, 24 - 26 April 2019

Determination of Highly Effective Attributes in Fold Level Classification of Proteins

POLAT Ö.
International Advanced Researches and Engineering Congress, 16 - 18 November 2017

Protein Fold Classification using Kohonen s Self Organizing Map

ÖZBUDAK Ö. , DOKUR Z.
2nd International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2014, 7 - 09 April 2014

Comparison of GHT based Approaches to Structural Motif Retrieval

FERONE A., ÖZBUDAK Ö.
ICIAP 2013 Workshops, 9 - 13 September 2013

Search of Protein Structural Blocks through Secondary Structure Triplets

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
3rd International Conference Image Processing Theory, Tools and Applications, IPTA'12, 15 - 18 October 2012 identifier

Hough Dönüşümü Kullanılarak Protein Yapısal Bloklarının Karşılaştırılması

ÖZBUDAK Ö. , DOKUR Z., CANTONI V.
Elektrik-Elektronik ve Bilgisayar Mühendisliği Sempozyumu, ELECO 2012, Turkey, 29 November - 01 December 2012

Motif Retrieval by Exhaustive Matching and Couple Co occurrences

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
9th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB'12, 12 - 14 July 2012

Structural Biology and Pattern Recognition

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
Convegno GIRPR'12, 21 - 23 May 2012

Protein Structural Motifs Search in Protein Data Bank

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
International Conference on Computer Systems and Technologies, CompSysTech'12, 22 - 23 June 2012

Structural Motif Representation and search through Unsupervised NN

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
22nd International Conference on Artificial Neural Networks, ICANN'12, 11 - 14 September 2012

Structural Analysis of Protein Secondary Structure by GHT

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
21st International Conference on Pattern Recognition, ICPR'12, 11 - 15 November 2012 identifier

Effects of the Facial and Racial Features on Gender Classification

ÖZBUDAK Ö. , KIRCI M., CAKIR Y., GUNES E. O.
IEEE MELECON 2010, 26 - 28 April 2010 identifier

Fast Gender Classification

ÖZBUDAK Ö. , TÜKEL M., ŞEKER S.
IEEE International Conference on Computational Intelligence and Computing Research, ICCIC'10, 28 - 29 December 2010

On Ear Biometrics

KOCAMAN B., KIRCI M., GÜNEŞ E. O. , ÇAKIR Y., ÖZBUDAK Ö.
IEEE EUROCON'09, 18 - 23 May 2009

Books & Book Chapters

Searching Structural Blocks by SS Exhaustive Matching

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
in: Lecture Notes in Bioinformatics, LEIF PETERSON, GIUSEPPE RUSSO, FRANCESCO MASULLI, Editor, ©Springer-Verlag Berlin Heidelberg, pp.57-69, 2013

Comparison of GHT-Based Approaches to Structural Motif Retrieval

FERONE A., ÖZBUDAK Ö.
in: Lecture Notes in Computer Science, A. PETROSINO, L. MADDALENA, P. PALA, Editor, ©Springer-Verlag Berlin Heidelberg, pp.356-362, 2013

Protein Structural Blocks Representation and Search through Unsupervised NN

CANTONI V., FERONE A., ÖZBUDAK Ö. , PETROSINO A.
in: Lecture Notes in Computer Science, A.E.P. VILLA et al., Editor, ©Springer-Verlag Berlin Heidelberg, pp.515-522, 2012